download the predictions (ts)
Data format
The format of each file is the next one:
#chr\tpos_upstr\tpos_downstr\tstr\tpas\ttotal_ends\tmax_ends_in_pos\tpos_max_ends
where \t represents a tab character.
- chr: chromosome
- pos_upstr: upstream positon of the EST cluster
- pos_downstr: downstream positon of the EST cluster
- str: strand
- pas: does the cluster has a Polyadenylation signal (0|1)?
- total ends: number of EST ending in the EST cluster
- max_ends_in_pos: max. number of EST ending exactly in the same position
- pos_max_ends: that position. If the number is negative, the cluster was invalidated because of false priming
Download the predictions
-
Mouse:
MM6/NCBI Build 34 (All chrms,
All chrms false priming filtered)
chrm 1,
chrm 2,
chrm 3,
chrm 4,
chrm 5,
chrm 6,
chrm 7,
chrm 8,
chrm 9,
chrm 10,
chrm 11,
chrm 12,
chrm 13,
chrm 14,
chrm 15,
chrm 16,
chrm 17,
chrm 18,
chrm 19,
chrm X,
chrm Y
-
Human:
HG18/NCBI Build 36.1 (All chrms,All chrms false priming filtered)
chrm 1,
chrm 2,
chrm 3,
chrm 4,
chrm 5,
chrm 6,
chrm 7,
chrm 8,
chrm 9,
chrm 10,
chrm 11,
chrm 12,
chrm 13,
chrm 14,
chrm 15,
chrm 16,
chrm 17,
chrm 18,
chrm 19,
chrm 20,
chrm 21,
chrm 22,
chrm X,
chrm Y
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