QISAMPLER ABOUT QUERY DOC & DOWNLOAD TUTORIALS CBDM LAB

QiSampler evaluates the prioritization done by experimental parameters of high throughput biological datasets.

Authors

This work is realised by members of the Computational Biological and Data Mining (CBDM) group of Miguel Andrade at the Max Delbrueck Center for Molecular Biology, Berlin, Germany.

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Citation

Fontaine JF, Suter B, Andrade-Navarro MA. QiSampler: evaluation of scoring schemes for high-throughput datasets using a repetitive sampling strategy on gold standards. BMC Res Notes. 2011 Mar 9;4:57.

QiSampler License (3-clause BSD, FreeBSD)

Copyright (c) 2010, Jean-Fred Fontaine
All rights reserved.

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Notes

R script was tested on Linux and Windows XP using R 2.9.0 or R 2.10.0. Web pages were tested on Linux or Windows using Firefox 3.6.8, Google Chrome 5.0, or Internet explorer 8.0.

Links

BDTcomparator: a program for comparing binary classifiers (Fijorek et al., 2011).

Changes