Matt Huska
Tel: +49-30-9406-4221
I'm a technician in Miguel Andrade's bioinformatics lab at the MDC in Berlin. I do the majority of the work for the Bioinformatics Core Facility here at the MDC, so if you have any bioinformatics tasks that you'd like help with then be sure to let me know.
Publications
Bröske AM, Vockentanz L, Kharazi S, Huska MR, Mancini E, Scheller M, Kuhl C, Enns A, Prinz M, Jaenisch R, Nerlov C, Leutz A, Andrade-Navarro MA, Jacobsen SE, Rosenbauer F. DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction. Nat Genet.
PubMed: 19801979
Fontaine, JF, Barbosa-Silva, A, Schaefer, M, Huska, MR, Muro, EM, Andrade-Navarro, MA. MedlineRanker: flexible ranking of biomedical literature. Nucleic acids research 2009, 37 (Web Server issue):W141-6.
PubMed: 19429696 Full Text: doi:10.1093/nar/gkp353
Sandie R, Palidwor GA, Huska MR, Porter CJ, Krzyzanowski PM, Muro EM, Perez-Iratxeta C, Andrade-Navarro MA. Recent developments in StemBase: a tool to study gene expression in human and murine stem cells. BMC Res Notes. 2009 Mar 10;2:39.
PubMed: 19284540 Full Text: doi:10.1186/1756-0500-2-39
Palidwor GA, Shcherbinin S, Huska MR, Rasko T, Stelzl U, Arumughan A, Foulle R, Porras P, Sanchez-Pulido L, Wanker EE, Andrade-Navarro MA. Detection of alpha-rod protein repeats using a neural network and application to huntingtin. PLoS Comput Biol. 2009 Mar;5(3):e1000304. Epub 2009 Mar 13.
PubMed: 19282972 Full Text: doi:10.1371/journal.pcbi.1000304
Huska MR, Buschmann H, Andrade-Navarro MA. BiasViz: visualization of amino acid biased regions in protein alignments. Bioinformatics (Oxford, England), 2007 Nov 20;23(22):3093-4.
PubMed: 17921493 Full Text: doi:10.1093/bioinformatics/btm489
Perez-Iratxeta C, Palidwor G, Porter CJ, Sanche NA, Huska MR, Suomela BP, Muro EM, Krzyzanowski PM, Hughes E, Campbell PA, Rudnicki MA, Andrade MA. Study of stem cell function using microarray experiments. FEBS letters, 2005 Feb 10;579(8):1795-801.
PubMed: 15763554 Full Text: doi:10.1016/j.febslet.2005.02.020
